Supporting Data mmcif_ma.dic
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Dictionary Revision History
| Version | Revision Date | Revision Description | |
|---|---|---|---|
| 1.2.5 | 2020-05-21 | Changes (bv) + Changed _category.mandatory_code to no for ma_restraints_group |
mmcif_ma.dic |
| 1.2.4 | 2018-07-27 | Changes (jh/bv/jw/gt/sb) + Added _ma_template_non_poly.comp_id + Fixed syntax and typos |
mmcif_ma.dic |
| 1.2.3 | 2018-07-20 | Changes (jh/bv/jw/gt/sb) + Updated MA_POLY_TEMPLATE_LIBRARY_LIST, MA_POLY_TEMPLATE_LIBRARY_COMPONENTS |
mmcif_ma.dic |
| 1.2.2 | 2018-07-19 | Changes (jh/bv/jw/gt/sb) + Added MA_QA_METRIC, MA_QA_METRIC_GLOBAL, MA_QA_METRIC_LOCAL + Added MA_SOFTWARE_GROUP |
mmcif_ma.dic |
| 1.2.1 | 2018-07-18 | Changes (jh/bv/jw/gt/sb) + Added MA_POLY_TEMPLATE_LIBRARY_DETAILS, MA_POLY_TEMPLATE_LIBRARY_LIST + Added MA_POLY_TEMPLATE_LIBRARY_COMPONENTS + Updated _item_sub_category.id for matrices and vectors + Updated MA_SOFTWARE_PARAMETER |
mmcif_ma.dic |
| 1.2.0 | 2018-07-17 | Changes (jh/bv/jw/gt/sb) + Added MA_ALIGNMENT_INFO, MA_TARGET_ENTITY_INSTANCE + Revised MA_TEMPLATE_DETAILS, MA_TARGET_TEMPLATE_POLY_MAPPING, MA_ALIGNMENT_DETAILS |
mmcif_ma.dic |
| 1.1.9 | 2018-07-16 | Changes (jh/bv/jw/gt/sb) + Revised MA_TEMPLATE_POLY_SEGMENT, MA_TARGET_TEMPLATE_POLY_MAPPING, MA_ALIGNMENT_DETAILS |
mmcif_ma.dic |
| 1.1.8 | 2018-07-16 | Changes (jh/bv/jw/gt/sb) + Addressed requirements for coevolution MSA and predicted contacts |
mmcif_ma.dic |
| 1.1.7 | 2018-07-13 | Changes (jh/bv/jw/gt/sb) + Revised MA_TEMPLATE_DETAILS, MA_TEMPLATE_POLY_SEGMENT, MA_TEMPLATE_POLY, MA_TEMPLATE_POLY_SEGMENT + Added MA_TEMPLATE_NON_POLY, MA_TEMPLATE_CUSTOMIZED |
mmcif_ma.dic |
| 1.1.6 | 2018-07-12 | Changes (jh/bv/jw/gt/sb) + Revised MA_ALIGNMENT_DETAILS, MA_PROTOCOL_STEP, MA_TARGET_TEMPLATE_MAPPING + Added MA_SOFTWARE_PARAMETER |
mmcif_ma.dic |
| 1.1.5 | 2018-07-11 | Changes (jh/bv/jw/gt/sb) + Revised MA_TARGET_TEMPLATE_MAPPING, MA_ALIGNMENT_DETAILS, MA_TEMPLATE_DETAILS + Revised MA_PDB_TEMPLATE, MA_TEMPLATE_COORD + Added MA_TEMPLATE_POLY_SEGMENT |
mmcif_ma.dic |
| 1.1.4 | 2018-07-10 | Changes (jh/bv/jw/gt/sb) + Added MA_TARGET_TEMPLATE_MAPPING, MA_PDB_TEMPLATE_TRANS_MATRIX, MA_TARGET_STRUCT + Removed MA_STEP_CRITERIA |
mmcif_ma.dic |
| 1.1.3 | 2018-07-10 | Changes (jh/bv/jw/gt/sb) + Added MA_PDB_TEMPLATE, MA_TARGET_REF_DB_DETAILS, MA_DATA_GROUP |
mmcif_ma.dic |
| 1.1.2 | 2018-07-09 | Changes (jh/bv/jw/gt/sb) + Updated MA_MODEL_LIST, MA_STRUCT_ASSEMBLY, MA_PROTCOL_STEP + Removed MA_STEP_INPUT, MA_STEP_OUTPUT |
mmcif_ma.dic |
| 1.1.1 | 2018-07-06 | Changes (jh/bv) + Release as initial version 1.1.1 |
mmcif_ma.dic |
Data Type List
| Data Type Code | Primitive Type Code | Regular Expression | Description |
|---|---|---|---|
| code | char | [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words ... |
| float | numb | -?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? | float item types are the subset of numbers that are the floating numbers. |
| int | numb | [+-]?[0-9]+ | int item types are the subset of numbers that are the negative or positive integers. |
| line | char | [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | char item types / multi-word items ... |
| name | uchar | _[_A-Za-z0-9]+\.[][_A-Za-z0-9%-]+ | name item types take the form... |
| text | char | [][ \n\t()_,.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | text item types / multi-line text ... |
| ucode | uchar | [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words (case insensitive) ... |
| uline | uchar | [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | char item types / multi-word items (case insensitive)... |
SubCategory List
| SubCategory Identifier | Description |
|---|
Units List
| Units Identifier | Description |
|---|---|
| 8pi2_angstroms_squared | 8pi2 * Angstroms squared (metres * 10(-10))2 |
| angstroms | Angstroms (metres * 10(-10)) |
Units Conversion List
| From Units&Identifier | To Units&Identifier | Operator | Conversion Factor |
|---|