Data Category struct_ref_seq

General

Category name
struct_ref_seq
Required in PDB entries
no
Category group membership
struct_group
Used in current PDB entries
Yes, in about 99.2 % of entries

Category Relationship Diagrams

70
View full category relationship diagram including all dictionary data categories
70
View abbreviated category relationship diagram including only those categories used in current PDB entries.

Category Description

               Data items in the STRUCT_REF_SEQ category provide a mechanism
               for indicating and annotating a region (or regions) of alignment
               between the sequence of an entity or biological unit described
               in the data block and the sequence in the referenced database
               entry.

Category Example

 
    _struct_ref_seq.align_id          alg1
    _struct_ref_seq.ref_id            seqdb1
    _struct_ref_seq.seq_align_beg     36
    _struct_ref_seq.seq_align_end     288
    _struct_ref_seq.db_align_beg      18
    _struct_ref_seq.db_align_end      276
    _struct_ref_seq.details
    ; The alignment contains 3 gaps larger than 2 residues
    ;