Data Category entity_src_gen
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General 
- Category name
- entity_src_gen
- Required in PDB entries
- no
- Category group membership
- entity_group
- Used in current PDB entries
- Yes, in about 87.6 % of entries
Category Relationship Diagrams 
View full category relationship diagram including all dictionary data categories
View abbreviated category relationship diagram including only those categories used in current PDB entries.
Category Description
Data items in the ENTITY_SRC_GEN category record details of
the source from which the entity was obtained in cases
where the source was genetically manipulated. The
following are treated separately: items pertaining to the tissue
from which the gene was obtained, items pertaining to the host
organism for gene expression and items pertaining to the actual
producing organism (plasmid).
Category Example
loop_
_entity_src_gen.entity_id
_entity_src_gen.gene_src_common_name
_entity_src_gen.gene_src_genus
_entity_src_gen.gene_src_species
_entity_src_gen.gene_src_strain
_entity_src_gen.host_org_common_name
_entity_src_gen.host_org_genus
_entity_src_gen.host_org_species
_entity_src_gen.plasmid_name
1 'HIV-1' '?' '?' 'NY-5'
'bacteria' 'Escherichia' 'coli' 'pB322'
Key Data Items 
Category Data Items
- _entity_src_gen.entity_id
- _entity_src_gen.gene_src_common_name
- _entity_src_gen.gene_src_details
- _entity_src_gen.gene_src_genus
- _entity_src_gen.gene_src_species
- _entity_src_gen.gene_src_strain
- _entity_src_gen.gene_src_tissue
- _entity_src_gen.gene_src_tissue_fraction
- _entity_src_gen.host_org_common_name
- _entity_src_gen.host_org_details
- _entity_src_gen.host_org_genus
- _entity_src_gen.host_org_species
- _entity_src_gen.host_org_strain
- _entity_src_gen.plasmid_details
- _entity_src_gen.plasmid_name